#21 – Cancer Vaccines: How the Immune System Learns to Recognize Tumors

Show notes

This time it's not about a virus, but about one of the most exciting developments in modern medicine: therapeutic cancer vaccines based on mRNA. Florian Krammer explains the basic principle — how a patient's tumor is sequenced, how the mutated genes (so-called neoantigens) are turned into a personalized vaccine, and how that vaccine trains the immune system to recognize and destroy cancer cells. Two recent trials show just how promising the approach is: a BioNTech vaccine against the notoriously aggressive pancreatic cancer, and a Moderna/Merck vaccine against melanoma, which now has five-year data. The vaccines aren't on the market yet and remain expensive to produce, but the direction is clear.

Links to the original and follow up publications for the pancreatic cancer vaccine: https://www.nature.com/articles/s41586-023-06063-y https://www.nature.com/articles/s41586-024-08508-4

Links to the original and follow up publications for the melanoma vaccine (unfortunately partially behind paywalls): https://pubmed.ncbi.nlm.nih.gov/38246194/ https://pubmed.ncbi.nlm.nih.gov/42223134/

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Krammer laboratory information

Krammer Laboratory at the Icahn School of Medicine at Mount Sinai https://labs.icahn.mssm.edu/krammerlab/

Ludwig Boltzmann Institute for Science Outreach and Pandemic Preparedness https://soap.lbg.ac.at/

Ignaz Semmelweis Institute https://semmelweisinstitute.ac.at/

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Conflict of interest statement

The Icahn School of Medicine at Mount Sinai has filed patent applications relating to influenza virus vaccines and therapeutics, SARS-CoV-2 serological assays and NDV-based SARS-CoV-2 vaccines which name me as inventor. Mount Sinai has spun out a company, CastleVax, to commercialize NDV-based SARS-CoV-2 vaccines and I am named as co-founder and scientific advisory board member of that company.

I have previously consulted for Curevac, Merck, Gritstone, Sanofi, Seqirus, GSK and Pfizer and I am currently consulting for 3rd Rock Ventures (US) and Avimex (Mexico).

My laboratory has been collaborating in the past with Pfizer on animal models of SARS-CoV-2 and with GlaxoSmithKline and VIR on the development of influenza virus vaccines and therapeutics and we are currently collaborating with Dynavax, Inspirevax and Inimmune on development of influenza virus vaccines.

My work in the on immunity and infectious diseases in the US is supported by the National Institutes of Health, but also by FluLab and Tito’s Handmade Vodka. In the past I have also received funding from the Bill and Melinda Gates Foundation, PATH and the US Department of Defense.

My work in Austria is supported by the Ludwig Boltzmann Gesellschaft and by the Ignaz Semmelweis Institute through the Medical University of Vienna.

Show transcript

00:00:06: And then their immune response to the vaccine and to the tumor was monitored.

00:00:12: The research team there found that eight of the sixteen made a T-cell response.

00:00:17: so they had a response for the vaccine, but other eight did not.

00:00:35: Hello and welcome in this week's episode of Virological!

00:00:49: This was recorded on June twenty ninth of twenty twenty six in Vienna.

00:00:54: Today we're going to talk about vaccines, but actually not about vaccines against infectious diseases.

00:01:01: We are going to be talking about anti-cancer vaccines and that's an interesting new development And there were a few publications That came out in the last months also in the past years and anti cancer vaccines have been in media quite a bit.

00:01:17: They wanted to shed light on their concept and then also discuss two different vaccines that have reported results relatively recently.

00:01:28: So for many types of cancers there are now good treatments, it's often a combination of surgery chemotherapy radiation And nowadays is also a lot of immunotherapy.

00:01:39: this could be antibodies That basically activate the immune response activate T cells.

00:01:46: This can be CAR T cells.

00:01:48: This could even be treatment with viruses that infect tumor cells and destroy them.

00:01:53: So all of these options are available right now for different types of cancers, and that has improved treatment and outcome tremendously.

00:02:01: but there's still some cancers that are hard to treat.

00:02:05: one of them is pancreatic cancer another one that is really hard-to-treat it very often unfortunately.

00:02:13: fateless glioblastoma that's a type of brain tumor, even melanoma although it got much easier to treat now is still very problematic disease.

00:02:24: And so I wanted to talk about this anti-cancer or antitumor vaccines that are in development.

00:02:31: these are therapeutic vaccine So they're given once somebody already has cancer and i'll get back to the concept you know in a minute.

00:02:39: but we have to differentiate them from prophylactic prevent cancer.

00:02:45: There's actually two of them that are routinely used, one thing against the human papillomavirus which can cause cancer in humans and another one is the hepatitis B virus which causes liver cancer in people.

00:02:59: And so these vaccines are prophylactic cancer vaccines while ones we're discussing today.

00:03:08: So as I said, i'm going to talk a little bit about the principle and then i am going to show or i m going to dog.

00:03:15: About two examples.

00:03:17: so what typically happens here is that there's surgery to remove the tumor could also be in some cases that just a biopsy staking but tumor material is used to basically develop the vaccine And it's going to be In all case vaccines that are specific for that person.

00:03:38: so it's personalized medicine.

00:03:40: that how you call this.

00:03:41: So basically material from the tumor is used and sequenced, typically regular tissue a healthy tissue is sequenced as well.

00:03:53: then these sequences are analyzed what often happens when a tumor forms?

00:03:59: There might be mutations, that may the causative reason for tumor formation.

00:04:06: And there maybe also additional mutation that occur in a tumor because tumor cells often mutate more frequently than regular cells and they grow so they can mutate it more.

00:04:17: So you have mutated genes of the tumor which means proteins are tumor-specific or tumor associated.

00:04:26: In a way, they are foreign to the rest of their body because in other bodies it doesn't exist.

00:04:31: We call them neo-antigens and that's what you're looking for when making an anti-cancer vaccine part of our natural body, right?

00:05:00: Now in some cases the body does that by itself.

00:05:05: The immune system does it by its self.

00:05:07: there might be a tumor cell that forms and the immune system recognizes it as foreign attacks it and removes it.

00:05:14: And There's never any cancer because the single tumor cells or a cluster of tumor cells is already removed before they're any signs of person being sick.

00:05:25: That's the best case scenario, and that probably happens in many people quite often.

00:05:31: But in contrast to that it can also be that there are two more forms... ...and the immune system doesn't recognize these new antigens sufficiently to suppress them.

00:05:41: And when I'm saying the immune systems very often this is a T cell response.

00:05:44: So T cells are immune cells.

00:05:46: they attack either infected cells or cells which have become malignant and remove them.

00:05:54: And so when cancer forms, often the T cells... The immune system is not strong enough.

00:06:01: Not targeted enough to actually remove the tumor.

00:06:04: So now for an anti-tumor or anti-cancer vaccine these sequences, this mutated sequence are identified and then they're basically usually the sections that mutate.

00:06:14: it are taking ...not the whole protein but just a mutated fragment.

00:06:19: They're stitched together in a row In an open reading frame, that's a protein encoding RNA in this case.

00:06:28: The RNA is synthesized and the RNA is formulated And it has been done very similar to mRNA vaccines That we have seen for COVID or other diseases.

00:06:38: If you immunize with that... ...the hope is that this vaccine induces now a strong immune response Specifically a T-cell response that targets the tumor because only the tumor has these mutated proteins these peptides that have the mutation in it.

00:06:56: Now, typically this vaccines are given several times and often when they're tested there combined with surgery or countermeasures treatment like immune therapy or radiation or chemotherapy.

00:07:12: And so first example I wanted to give is vaccine against pancreatic cancer.

00:07:18: Pancreatic cancer relatively deadly.

00:07:22: If surgery is performed to remove the tumor, typically the cancer recurrence comes back seven or nine months after the surgery in about ninety percent of individuals.

00:07:37: And what people often look here at it's a five-year overall survival after surgery and that if only surgeries perform this about eight to ten percent.

00:07:47: so very low survival rates.

00:07:50: If surgery is performed and then there are other treatments, the recurrence of the tumor can be slowed.

00:07:57: So typically it takes fourteen months for to come back but comes in about eighty percent of patients.

00:08:03: that's even when immunotherapy used or chemotherapy so on and so forth I use In this case overall survival still below thirty percent again not very high.

00:08:14: pancreatic cancer really a big problem.

00:08:17: And so in this trial, they focused on pancreatic cancer.

00:08:21: This was a small phase one trial.

00:08:23: it wasn't necessarily geared towards showing an effect with more geared towards looking at the immune response but I did see and affect...this is by the way typical for Phase One trial.

00:08:36: you're looking for safety or maybe for type of immunity induced But their not typically geared to control groups even if there's one.

00:08:47: And so this was done with a vaccine called AutoGene Cevumeran, which was developed by BionDec and the trial was conducted at Memorial Sloan Catering.

00:08:57: Which is really one of the prime hospitals in terms of cancer research but that's New York City!

00:09:06: In the end they had sixteen patients who initially got surgery to remove the tumor, then the tumor was sequenced by informatics.

00:09:18: Analysis were done and for each patient a vaccine was designed.

00:09:23: during that time they also...the patients also got immunotherapy.

00:09:27: They get chemotherapy And Then they got eight-to nine doses of this vaccine That was designed For each patient separately.

00:09:35: The immune response to the vaccine was monitored and the research team there found that eight of the sixteen made a T-cell response.

00:09:48: so they had a response.

00:09:50: And the other eight did not.

00:09:52: Now, they already did an analysis after approximately two years in which group didn't make their response.

00:10:01: They saw that there were recurrence after approximately thirteen months in, I think seven out of the eight patients.

00:10:10: So that cancer came back.

00:10:13: but for this initial two years they ate it had a response that responded to.

00:10:18: the vaccine actually has no recurrence and more recently paper came outward then looked four-four year outcome And six off day who mounted the response still were two or three.

00:10:35: two of them had developed cancer again, and one of them unfortunately died.

00:10:40: So seven out eight stayed alive.

00:10:43: six out the eight stayed tumor-free.

00:10:47: On the other side group that did not respond I mean basically same treatment but their immune system didn't respond to the vaccine.

00:10:55: Here five off eight were still alive after four years And it's better than at a typical treatment now.

00:11:04: Of course This is a small trial, and data from much larger trials are needed to look at the actual effect.

00:11:12: But for type of cancer that's as deadly as pancreatic cancer this actually pretty impressive data.

00:11:20: The second trial I wanted to describe was an entymelanoma vaccine.

00:11:28: It was a phase-to-be trial done in about one hundred fifty patients And it was performed in Australia and the US.

00:11:35: Larger trials are usually done in different clinics, often in different countries.

00:11:40: As I said this is a phase two B trial.

00:11:43: What we tested here was mRNA-Forty One Fifty Seven Forty Ones that know COVID vaccines.

00:11:51: If something starts with mRNA then means its made by Moderna.

00:11:55: So This Was A Moderna Vaccine That Is Tested & Being Developed Together With Merck.

00:12:02: So it was basically a very similar approach.

00:12:05: They also recruited patients in two thousand twenty one, then surgery was performed to remove the melanoma.

00:12:14: by the way this was stage three B Stage four melanoma that was looked at and these vaccines were formulated again.

00:12:23: This was done for each individual patient.

00:12:27: The highest number of neo-antigens included was thirty four.

00:12:32: So you can see that there is quite some mutations in these tumors.

00:12:35: and so, In this trial they had two different groups.

00:12:38: one group received an immune therapeutic monoclonal antibody checkpoint inhibitor And the other group received a checkpoint inhibiter monoclonal antibody plus the mRNA.

00:12:51: forty one fifty seven anti-cancer vaccine.

00:12:55: By the way, this vaccine is named in Dismaran autogene also because it's the genes from patients that are sequenced for looking for mutations.

00:13:11: and so what they found here is recurrence free.

00:13:14: survival was about fifty percent over five years in the individuals who got immune therapeutic alone.

00:13:25: And recurrence-free survival, over five year was seventy two percent of those who had gotten monoclonal antibody and immunotherapeutic and the vaccine.

00:13:36: so significant improvement here.

00:13:39: So recurrence free survival just basically means how many people the cancer came back.

00:13:44: You can also look at survival rates and they are better here for melanoma than for pancreatic cancer.

00:13:51: And so with the immune therapeutic alone, the survival rate over these five years was eighty-six percent.

00:14:00: If the immunotherapeutics were given together by the vaccine then the five year survival rate is ninety two percent.

00:14:10: Again this might not be as impressive what we have seen or what I've explained about the pancreatic cancer, but this is a larger study and its effect is pretty significant.

00:14:24: Also in this case the vaccine had to be given quite often that they were giving nine doses of the vaccine.

00:14:30: so i think some of these approaches are really what could save a lot people from cancer.

00:14:41: It's not clear how long it will take for these vaccines, for the therapeutic vaccines to get licensed but I think they are on a good way.

00:14:49: The problem currently still is that this is relatively expensive, as you can imagine.

00:14:53: You have to have surgery then there needs to be the sequencing of the tumor and a healthy tissue bioinformatics analysis And specifically for dead patient the vaccine was made.

00:15:04: Can't imagine it's not cheap.

00:15:06: at some point I heard but i'm no hundred percent sure if its actually accurate That costs about one hundred thousand dollars per patient.

00:15:14: But this again might change.

00:15:15: Technology gets better, technology improves and becomes cheaper And the hope is that at some point there may even be vaccines against cancer types like glioblastoma.

00:15:28: So it's really something that moving in right direction hopefully moves very fast.

00:15:34: That was for today from Virological.

00:15:36: I promise next time we're going to talk about viruses.

00:15:40: As always, if you have any questions concerns or comments please just write an email to Virological at podcastwerkstatt.com and If you like this podcast You can support us on steady.

00:15:52: Thanks for listening And until next time Bye!

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